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Happy New Year!
The faculty, students and staff of BioFrontiers are looking forward to an exciting 2014. From research, symposiums and seminars, all in the name of science, our calendars are filling up with some amazing events.
Make sure you look at our upcoming events (to the right on this page) for dates, locations and times. Additional information on all our events can be found on our website too.
We appreciate all your support this year, and we are looking forward to sharing more of our stories with you in the new year. |
JSCBB Mini Symposium encourages collaboration
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JSCBB's Butcher Auditorium hosted a full house for the
JSCBB Mini Symposium.
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It looks a lot like the other buildings on the CU-Boulder campus, with its rustic Italian-inspired tile roof and red brick, but the Jennie Smoly Caruthers Biotechnology Building (affectionately known by its inhabitants as JSCBB) is something quite different. It was designed to support those scientists and engineers whose research was driving them into other academic areas, and who wanted to use the best tools from other disciplines to do their work. This building houses engineers, biologists, chemists, biochemists, computer scientists and physicists. These are the CU faculty that speak "interdisciplinar-ese".
In a building where a biochemist can have barbecue with a biofuels expert, good ideas are bound to proliferate. The challenge is getting these dedicated researchers away from their labs and talking to each other. It takes conversation to initiate collaboration. To help this process along, the JSCBB Mini Symposium was born.
The JSCBB Mini Symposium took place on July 29 with 15 faculty members presenting on topics that spanned from biomarkers for cancer, to tissue engineering, biofuels and the microbiome. Faculty members represented the groups in the JSCBB: the BioFrontiers Institute, the Division of Biochemistry and the Department of Chemical and Biological Engineering. JSCBB's Butcher Auditorium was packed for all five sessions throughout the day. The second JSCBB Mini Symposium is scheduled for January 8.
"It's sort of like being at an international conference. We're hearing all these great talks and listening to incredible talent," says BioFrontiers Institute Director, Tom Cech. "The best part is that we never have to leave the building." Read more here
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CU-Boulder student team wows judges at biology competition
When this year's iGEM team at the University of Colorado Boulder began meeting early this year, they wanted to take what they knew about biology, and use it to build something entirely new. iGEM, or International Genetically Engineered Machine, is the top synthetic biology competition in the world and after a foundation-building first year, the CU-Boulder team wanted to make an impact in 2013.
Thirty CU undergraduate and graduate students from a wide range of science and engineering departments worked together to design their project: "DIY Synthetic Biology," taking apart and reconstructing lab techniques and tools and improving them. Over the summer, six students completed the project. Then, these students boarded a plane to Montreal, Canada with their faculty mentor, BioFrontiers' Robin Dowell, practiced their presentation until 2:00 a.m., and competed with 52 North American teams, earning an iGEM special award and their place in the iGEM World Competition in Boston in November. The team ultimately did not place in the World competition, but left with plans to compete at a much higher level next year.
 | BioFrontiers' Robin Dowell |
"There were a lot of proposals in the competition, but CU delivered an actual product," says CU iGEM Team Mentor Robin Dowell, who is an assistant professor in Molecular, Cellular and Developmental Biology and a faculty member at the BioFrontiers Institute. "The team used a lot of ingenuity; slick lab techniques that make it cheaper and easier to conduct important research. They really gave the judges a lot to talk about."
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 Save the dates for
these events:
JSCBB Mini Symposium II Jan 8, All Day JSCBB - Butcher Audi. (A115) BioFrontiers Seminar Jim Wells UCSF - Mission Bay Mar 11, 4:00 pm JSCBB - Butcher Audi. (A115) BioFrontiers Seminar Steve Quake Stanford University April 8, 4:00 pm JSCBB - Butcher Audi. (A115) BioFrontiers Seminar L. Mahadevan Harvard University May 13, 4:00 pm JSCBB - Butcher Audi. (A115) JSCBB Mini-Symposium III May 23, All Day JSCBB - Butcher Audi. (A115) BioFrontiers Symposium on Large Datasets & Genomics May 28, All Day JSCBB - Butcher Audi. (A115) BioFrontiers Special Seminar - Butcher Awardee Richard Axel Columbia University Oct 7 - 7:00 pm Location TBD
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IQ Bio Blog:
Science is Hard
 | Joey Azofeifa is a second-year, computer science graduate student in the IQ Biology program. |
It must be said that I have had a very difficult time writing this blog-post. The reason, after a few too many cups of coffee, came clear to me: Science is Hard (and I worried if that's what I should tell my readers). Certainly there are intellectual struggles in Science, the esoteric aspects of an algorithm, and the even more enigmatic explanations of it on StackOverflow, can be mind-numbingly painful. But the real reason that Science is Hard (at least from the perspective of a lowly and naïve graduate student) circumvents "advanced" material and is better understood as an emotional one.
At the point of a really innovative thought, the scientist exists outside the documented, outside the history. At such an apex, he or she is met with a flurry of emotions: motivation, passion, strength and, to a degree, reluctance. But why feel the fear? Did Richard Feynman feel the fear? Albert Einstein? Probably. No, definitely. Any truly original moment identifies the thinker as different and such a separation from the comfort of the known begets questions of assuredness, obligation and failure. And so, Science is Hard because the very nature of Science is to innovate, push-past and discover and these struggles bring along the unwelcome feelings of separation.
As someone who works at the interface of computer science and biology, let me tell you: I feel the fear. Not because I would presume to have had something truly original but because such an interface is so new, untouched and foreign that every step is fraught in new territory. New textbooks are created every year to describe the field of "bioinformatics" but with very little collective agreement. Why? Well I think there are just so few foundational principles for bioinformatics that consensus still waits; I mean it's a chaotic, free-for-all.
Within this spinning cacophony, innovation is ripe for the picking and this reason (among others) motivated a move from a background in biology to a graduate degree in computer science. Should I emphasize my thesis again? I think so: Science is Hard. The move away from the comfortable pleasures of a biological background was/is hard. But don't worry, here is the silver lining: it has been a wildly rewarding experience.
Without going into the gory details of my 2-hour nights of sleep, eye's glazed by a terminal screen and the quiet jitters of too much caffeine, I can honestly say I am glad to have taken the plunge into computer science. Not only because the field of bioinformatics is "hot" but such a transition highlights the whole purpose of Science: to stand outside the comfortable. Read more here
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More about BioFrontiers
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More information?
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