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Ocean Genome Legacy | Summer 2015 Newsletter

This June, we hope you are enjoying an educational and inspiring National Ocean Month!

 

In this issue, we highlight some recent contributions to our collection, explore how OGL and partners are detecting genetically modified fish, and consider the ecological effects of a transcontinental canal.

 

Click here to learn more about OGL and its mission.
As always, you can follow our expeditions and other news from the marine world on our Facebook and Twitter pages!

Sincerely,

Dan Distel, Ph.D.
Ocean Genome Legacy
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SpotlightSpotlight Contributor at OGL 

 

NU graduate student Chris Baillie donated research samples to OGL.(Credit: Chris Baillie)
What do an angel shark, a stargazer fish, and a marine isopod ("sea louse") have in common? All of these bottom-dwelling Atlantic species were donated to OGL by Northeastern University graduate student Chris Baillie. Chris collected these samples during a research trip to Chincoteague Island, Virginia, for his work on fish ecology.

We're lucky to have such grea
t collaborators here at the Northeastern University Marine Science Center!

 

GMDetecting Genetically Modified Fish  

 

Are genetically modified fish coming your way?

 

Genetically modified (GM) fish might be coming soon to a supermarket near you. Certain food fish such as salmon and tilapia have been genetically engineered to grow more quickly. These GM fish are not on the market yet! They still need to be approved and regulated. The first step toward understanding and regulating GM fish is identifying them. How do you know if that salmon at the fish market or in your local river is GM?

 

OGL is helping Dr. Filipe Pereira at the University of Porto, Portugal, to develop a detection kit for GM fish. GM fish contain foreign DNA from other fish species to change the production of growth hormones. For example, certain GM Atlantic salmon contain a growth hormone gene from Chinook salmon combined with a genetic "on" switch from ocean pout. Dr. Pereira's kit will detect this foreign DNA and others, starting with just a small sample of fish tissue.

 

Dr. Filipe Pereira (left) at the University of Porto (right) is using DNA from OGL to detect genetically modified fish. 
(Credit: Filipe Pereira and City of Porto)  
To design and test-drive this detection kit, Dr. Pereira needed DNA from the "donor" species whose growth hormone genes are found in GM fish. Fortunately, OGL's biorepository contains genetic materials from more than 1,000 fish species, and our collaborators at the University of Kansas Ichthyology Collection offered additional species. OGL sent Dr. Pereira DNA from grass carp, rainbow trout, Chinook salmon, and ocean pout. The team in Portugal is presenting their research and working to make their detection kit as specific and sensitive as possible. The ability to detect GM fish will help scientists, policymakers, and shoppers make informed decisions about this potential new arrival to the seafood section.


DNA from the ocean pout (above) is used to make GM salmon grow rapidly.
(Credit: Harvard Museum of Comparative Zoology via Encyclopedia of Life)

 

CanalBiodiversity and the Nicaragua Canal

 

 What's in store for Nicaragua's wildlife?   

 

The map of the Americas is about to change, with construction of a new cross-country canal in Nicaragua. This mega-project aims to connect the Pacific Ocean and the Caribbean Sea by a 172-mile route that cuts through Lake Nicaragua. Construction, conducted by a private company from Hong Kong, has been in progress since December 2014. Despite the potential global impact of this massive project, there has not been a study of the canal's ecological effects. The Nicaraguan government hopes that the canal will bring jobs and economic growth. 

 

How might this continental re-shaping affect Nicaragua's biodiversity? Dr. Jorge Huete-Perez, vice president of the Academy of Sciences of Nicaragua and former visiting scientist at OGL, is bringing international attention to the issues at stake. A community of scientists, led by Dr. Huete, is calling for scientific studies to protect the future of Nicaragua's environment and its people.

 

Nicaragua has rich biodiversity in its rainforests, mountains, coral reefs, and freshwater. Lake Nicaragua (or Cocibolca) is the largest lake in Central America and larger than the state of Delaware. It supplies drinking water and irrigation, and it is home to sawfish, tarpon, and rare freshwater sharks. Nicaragua's coasts are nesting grounds for endangered sea turtles, and the Caribbean coast supports coral reefs and mangroves. 

 

Dr. Huete and colleagues are concerned that the plan to dredge Lake Nicaragua will harm water quality for aquatic life as well as the residents, agriculture, and fisheries of the region. Once the canal receives shipping traffic, the scientists warn of even more severe impacts, such as pollution, saltwater contamination of the lake, and invasive species that often hitchhike in the bilge water of passing ships. These threats could destroy Nicaragua's native species, such as cichlid fish that are found nowhere else in the world.

 

Map of the proposed Nicaragua canal route.
(Credit: Environ. Sci. Technol.)
In a recent publication, Dr. Huete and colleagues requested an ecological study on the potential effects of the canal project on water quality, biodiversity, and ecosystems. They note that it's important for this study to be conducted by independent experts who do not work for the canal construction company. 

The scientists also advocate for better government transparency and an economic study, including a cost-benefit analysis. During the next five years of projected construction, Dr. Huete and colleagues call for this ambitious project to be guided by solid science and a long-term view.

 

Read more from this community of scientists here and here.
 

 

Coming Soon... Between Tides  

 

What's this? Find out next time!

Life is tough when you're a soft-bodied creature in a rocky world pummeled by the surf! 


Next time, we'll explore our collaborators' work on a variety of marine invertebrates found at the ocean's edge.


 

Want to help OGL document and preserve the spectacular genetic diversity of our world's oceans? 

 

 

Thank you for your continued support!